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aqme
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E
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A
analyze_abnormal() (qcorr method)
analyze_isom() (qcorr method)
analyze_normal() (qcorr method)
aqme
module
aqme.cmin
module
aqme.csearch.base
module
aqme.filter
module
aqme.qcorr
module
aqme.qcorr_utils
module
aqme.qdescp
module
aqme.qprep
module
aqme.utils
module
aqme.vismol
module
auto_sampling() (csearch method)
C
cclib_atoms_coords() (in module aqme.utils)
cclib_init() (qcorr method)
charge_mult_cmin() (cmin method)
check_isomerization() (in module aqme.qcorr_utils)
check_level_of_theory() (qprep method)
check_run() (in module aqme.utils)
cleanup() (qdescp method)
cmin (class in aqme.cmin)
collect_xtb_properties() (qdescp method)
command_line_args() (in module aqme.utils)
compute_confs() (csearch method)
conformer_generation() (csearch method)
csearch (class in aqme.csearch)
D
detect_linear() (in module aqme.qcorr_utils)
dihedral_filter_and_sdf() (csearch method)
E
embed_conf() (csearch method)
ewin_filter() (in module aqme.filter)
F
filters() (in module aqme.filter)
finalize() (Logger method)
fix_imag_freqs() (qcorr method)
format_lists() (in module aqme.utils)
full_check() (in module aqme.qcorr_utils)
G
gather_files_and_run() (qdescp method)
gen_connectivity() (in module aqme.qcorr_utils)
genConformer_r() (csearch method)
geom_filter() (in module aqme.filter)
get_cclib_params() (in module aqme.qcorr_utils)
get_cmin_model() (cmin method)
get_conf_RMS() (in module aqme.utils)
get_header() (qprep method)
get_info_input() (in module aqme.utils)
get_json_data() (in module aqme.qcorr_utils)
get_tail() (qprep method)
I
Ir_SP_filter() (in module aqme.filter)
J
json_gen() (qcorr method)
L
load_from_yaml() (in module aqme.utils)
load_jobs() (csearch method)
load_variables() (in module aqme.utils)
Logger (class in aqme.utils)
M
matching_fun() (in module aqme.filter)
min_after_embed() (csearch method)
min_and_E_calc() (csearch method)
module
aqme
aqme.cmin
aqme.csearch.base
aqme.filter
aqme.qcorr
aqme.qcorr_utils
aqme.qdescp
aqme.qprep
aqme.utils
aqme.vismol
mol_from_sdf_or_mol_or_mol2() (in module aqme.utils)
MolTo3DView() (vismol method)
move_file() (in module aqme.utils)
O
organize_outputs() (qcorr method)
P
pre_E_filter() (in module aqme.filter)
Q
qcorr (class in aqme.qcorr)
qcorr_fixing() (qcorr method)
qcorr_processing() (qcorr method)
qdescp (class in aqme.qdescp)
QM_coords() (in module aqme.utils)
qprep (class in aqme.qprep)
qprep_coords() (qprep method)
R
rdkit_to_sdf() (csearch method)
read_file() (in module aqme.utils)
read_xyz_charge_mult() (in module aqme.utils)
RMSD_and_E_filter() (in module aqme.filter)
run_command() (in module aqme.utils)
run_sp_xtb() (qdescp method)
S
set_metal_atomic_number() (in module aqme.utils)
substituted_mol() (in module aqme.utils)
summ_search() (csearch method)
V
vismol (class in aqme.vismol)
W
write() (Logger method)
write_csv_boltz_data() (qdescp method)
write_qcorr_csv() (qcorr method)
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